Showing posts with label Virology. Show all posts
Showing posts with label Virology. Show all posts

Difference Between Living and Non-Living Things

BASIS FOR COMPARISONLIVING THINGSNON-LIVING THINGS
MeaningLiving things are the creatures that are alive and compose of tiny particles, i.e. cells.Non-living things refers to those objects or items, that do not exhibit any sign of life.
Exampleliving thingnon-living-thing
OrganizationHighly organizedNo such organization
ConciousnessThey sense things and react to external stimulus.Non-living things do not sense things.
HomeostasisMaintain a stable internal environment to make cells function.Do not maintain a stable internal environment.
MetabolismReaction like anabolism and catabolism occurs.No metabolic changes occurs in non-living things.
GrowthAll living things undergo a regulated growth.Non-living things do not grow.
EvolutionLiving things go through evolution.Non-living things do not undergo evolution.
SurvivalDepends on food, water and air for survival.Does not depend on anything for survival.
Life-spanHave a certain life span, after which they die.There is no such thing like life span.


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Difference between Virus & Living Organisms

Both viruses and living orgamisms contain genetic material. A virus has a capsid that can be DNA or RNA. Viruses are able to use living cells to get their DNA copied and so they can produce new viruses. This is a food web containing living organisms.

For Details Please see this pdf

Viruses are Viruses are not complete living complete living organisms. They are smaller and simpler in structure than even the simplest prokaryotic cells. 1 „ However, because they have some characteristics of life.
Like living organisms, viruses contain genetic instructions. However, they lack the machinery needed to carry out these instructions. „On their own they are inert chemicals 3 On their own, they are inert chemicals chemicals and cannot perform any life functions. „ However, if they enter a living host cell, they can use the cell’s machinery to replicate.


Types of Antiviral Drugs:

Amantadine is a low molecular weight quantity which is operational along with-door to influenza virus A. It prevents optional accessory as dexterously as un-coating of endocytosed virions. It binds to the viral matrix proteins of influenza virus and thereby prevents the conformational changes required for un-coating. A connected merged Rimantadine has a related effect approaching influenza virus. A number of nucleoside analogues have been used as antiviral drugs. Among these are acyclovir, idoxuridine, ribavirin, vidarabine, trifluridine, azidothymidine etc.




Structures of Acyclovir and Deoxyguanosine



Structures of Acyclovir and Deoxyguanosine

Because of the structural sympathy of acyclovir and deoxyguanosine, the viral enzyme, nucleoside kinase phosphorylates acyclovir to its phosphate forming a traitorous nucleotide which cannot be incorporated into DNA i.e. DNA polymerization is inhibited. Acyclovir derivatives, gone famciclovir and ganciclovir are same in mode of operate .

Inhibition of Viral DNA Synthesis

Acyclovir and its derivatives have been found to be energetic adjoining herpes virus infections, particularly genital herpes. It has after that effect going approximately for chicken pox. Other nucleoside analogues have along with been used as antiviral drugs, taking into consideration idoxuridine (5-iodo-deoxyuridine), trifluridine, vidarabine (adenine arabinoside) etc.

Idoxuridine is a thymidine analogue  and is incorporated into viral DNA blocking bonus polymerisation of DNA. Vidarabine has structural empathy once deoxyadenosine and has a associated effect on the subject of viral DNA synthesis as idoxuridine. These drugs are mainly used in infections caused by herpes virus.

Structural Similarity along together in addition to Idoxuridine and Thymidine

 Structural Similarity between Idoxuridine and Thymidine

An important strategy of inhibiting retroviruses such as HIV is to block the moving picture of reverse transcriptase, the viral enzyme required for synthesis of DNA from the genomic RNA of these viruses. Reverse transcriptase is absent in the host cells. Several chemotherapeutic agents have been developed as potential reverse transcriptase inhibitor, such as zidovudine (azidothymidine, AZT), didanosine and zalcitabine.

These agents inhibit synthesis of DNA from viral RNA by specifically blocking the to-do of reverse transcriptase. They have been found useful in HIV infection causing AIDS. Zidovudine structurally resembles thymidine (Fig. 6.38).

Structure of Zidovudine

Didanosine and zalcitabine are less toxic than zidovudine. These agents exploit as competitive inhibitors of thymidine in the reverse transcription of viral genomic RNA to ds-DNA. As this step is vital for viral replication, these agents can effectively quantity uphill less viral multiplication in AIDS patients.

The mechanism of act appears to be the incorporation of the drug in the elongating DNA chain in area of thymidine, thereby inhibiting bonus count of nucleotide. The presence of the azide action in 3-viewpoint in place of an OH-outfit which is valuable for DNA polymerisation prevents chain elongation. Didanosine (dideoxyinosine) and zalcitabine (dideoxy- cytidine) have a thesame mode of produce an effect.

Another agent which inhibits reverse transcription of retroviruses is foscarnet (phosphonoformic cutting). It inhibits DNA polymerization by binding to the pyrophosphate receptor, in view of that that merger of nucleotides from the precursor nucleoside triphosphates into DNA cannot come clean place. Other reverse transcriptase inhibiting drugs add occurring nevirapine and delaviridine.

Another admittance to act HIV is to inhibit the viral protease which is essential for cleaving polyprotein molecules into fragments that are used for assembly of auxiliary viral particles. The protease inhibitors developed as potential drugs for HIV therapy complement indinavir, saquinavir and ritonavir.

The protease inhibitors are amino bitter analogues and they achievement as competitive inhibitors in the viral protease salutation. As a outcome, the long protein molecules cannot be cleaved to smaller ones required for virion assembly. Thus, assembly of progeny virions is prevented.

One of the best strategies to manage a viral disease would be to prevent the virus from entering the turn host cells. This could be achieved through vaccination which induces restructure of antibodies that would react taking into account the surface proteins of viral particles and would defer their relationships into the host cell. In recent time, antiviral drugs have been synthesized which fighting in a re same habit.

One class of these drugs is the neuraminidase inhibitors which are creature used adjoining influenza virus. The virions of influenza virus contain two types of spikes upon their envelope  one type contains haemagglutinin ruckus and the calculation type contains neuraminidase objection.

These spikes receive portion in add-on of influenza virus to the cells of the respiratory tract of the host. Neuraminidase inhibitors, bearing in mind zanamivir and oseltamivir phosphate, block optional connection of influenza virus particles by clogging the sites of the host cell surface where the virions could include.

The concern to the lead of these not well-disposed of-influenza drugs was only possible because the exact knowledge of biochemistry of extra of the virus to the host cell surface was known. This proves that considering strengthening of knowledge of viral infection in difficult, more and more operating antiviral drugs would be discovered. But till now, the most in pursuit behave adjoining viral diseases continues to be vaccination which induces both humoral (through antibodies) and cell-mediated (through killer T-lymphocytes) immunity in the body.

Most vaccines against viral diseases utilize inactivated or attenuated viruses. Such vaccines e.g. the Salk vaccine against poliomyelitis, uses alive viruses inactivated by formaldehyde, or Sabin vaccine, next against the same disease, uses attenuated viruses.

These vaccines have certain amount of risk, though intensely negligible, because the inactivation may not be 100 per cent, or in rare cases attenuated viruses may revert to their indigenous pathogenic form. In more recent years, sub-unit vaccines have been developed by genetic engineering.

For example, hepatitis B viral vaccine has been prepared by transferring the viral gene coding a capsid protein to yeast. The transgenic yeast produces the viral capsid protein which after unfriendliness and purification has been used to prepare the hepatitis B virus vaccine. The vaccine containing the capsid protein induces immunity against hepatitis B infection. These vaccines are sometimes called DNA vaccines, because they change recombinant DNA technology.



Image result for Prions:Prions were discovered in 1982 by Stanley Prusiner as the causative agent of an infectious sickness of sheep, known as scrapie. Prusiner was awarded the Nobel Prize in 1997 for his pioneering operate as regards the subject of this late accretion class of infectious agent. The most significant feature of prions is that they have been claimed to consist of only protein.

The pronounce, prion was coined to characterize these proteinacious infectious particles. Prions survive heat, radiation and chemical treatments that can normally inactivate viruses. They are susceptible to some protein hydrolyzing enzymes, but are resistant to nucleases which perform that they fighting not contain any nucleic trenchant, either DNA or RNA.

This raises an important ask: how can an infectious agent consisting of proteins adopt its own replication, because a universal characteristic of all cellular organisms as competently as viruses or even viroids is to addition genetic reference in nucleic acids, DNA or RNA. Prions are exceptions and their execution to replicate in impure hosts goes adjoining the Central Dogma.

Research during the last decade has shown that the Prion protein (PrP) is a harmless to your liking sufficient constituent discharge adherence concerning the surface concerning the neurons and glial cells of the brain in vertebrates and invertebrates. This protein is produced initially as a precursor protein containing 253 amino sour residues. Its role has been shown to bind copper ions and thereby helping the brain cells to resist the toxic effects of intensely reactive oxygen radicals.

The enzyme, superoxide dismutase, which protects cell from oxygen radicals, requires copper for its life. In absence of PrP, the cells cannot bind copper and the enzyme remains inactive. This leads to death of the cells due to oxygen toxicity. The allowable ample PrP is encoded by host cell chromosomal genes. The enough protein was designated by Prusiner as PrPc and the anomalous scrapie-inducing proteins as PrPsc.

The flashing protein has been shown to possess the same amino sour sequence as the customary one, but they differ in conformation. As a result of such conformational fine-impression, the uncharacteristic protein shows difference in properties.

Whereas, the allowable protein is soluble in some detergents and is destroyed by proteases, the irregular protein is not. Moreover, the uncharacteristic protein has mostly a pleated-sheet structure which is absent in adequate protein. As a result, the peculiar protein tends to clump together forming aggregates within the distorted cells, possibly blocking molecular traffic in the polluted cells ultimately leading to their death.

When peculiar prion protein (PrPsc) from a diseased animal is introduced into a healthy individual containing the all right prion-protein (PrPc), the individual becomes diseased, even if the incubation time is long. This means that PrPsc is infective. It has been suggested that the atypical prion-protein binds to the plenty protein forming a dimmer (PrPc  PrPsc) and alters the conformation of PrPc to PrPsc.

The newly formed PrPsc molecules can in outlook interact when PrPc bringing roughly linked conformational modify. These irregular molecules mount happening in the brain cells, because they are protease resistant and produce the characteristic symptoms. The brain tissues acquires a sponge-subsequent to declare behind than gradually increasing blank areas of dead tissues, producing what is known as spongiform encephalopathy.

Prions causing a specific illness, taking into account scrapie, have been shown to possess strains which differ in virulence. Moreover, a particular strain can alter in the degree of virulence. In auxiliary pathogenic agents, related to bacteria and viruses, such changes are known to be due to mutation.

In encounter of prions too, such changes might be due to changes in the genes coding for the prion protein. Some scientists yet acceptance to that prions are in fact made happening of a tiny nucleic sour enclosed in a prion protein molecule and they select calling prions as virinos. However, till now no nucleic hostile, either DNA or RNA has been detected in prions and the existence of appropriately called virino has not been proved.

Prions were discovered in search of the causative agent of scrapie of sheep. Scrapie is a neurological sickness which is infectious causing a loss of coordination of leisure goings-on and the affected animals tend to scratch their bodies adjoining walls or rocks. The sickness is usually fatal. It was at the forefront called a slow virus sickness, but fused was found to be caused by prions.

Another animal sickness, commonly known as Mad-Cow Disease came into wipe out in the Great Britain in 1990s. This was moreover ascribed to an infection by prions. This sickness, technically called Bovine Spongiform Encephalopathy (BSE), entered into the cattle by feeding them as soon as protein supplements of sheep containing bones, meat, brains, spinal columns etc.

The sheep-products evidently were contaminated taking into consideration prions of scrapie. The summit of the Mad-Cow Disease in the British Isles reached during 1992-93 behind thousands of cattle heads were afflicted. This heavily affected the meat industry of that country. Not unaccompanied that, a more colossal effect was that the consumption of beef was suspected to cause a fatal human disease, known as Creutzfeldt-Jacob Disease (CJD) which is afterward a prion-inflicted complaint resulting in the go before of spongiform encephalopathy.

The sickness requires a era of 7 to 8 years for full fee of symptoms and is usually fatal. As such, it is a scarce illness, but several cases were reported in Great Britain during the last decade and a practicable member together in the midst of the Mad-Cow Disease of cattle and CJD was suspected and officially admitted.

Apart from scrapie and Mad-Cow Disease, prion-infection plus causes the mink encephalopathy. Mink, an animal valued for its excellent fur, buddies this prion infection with through feeding of meat of diseased animals. Mink encephalopathy is with a transmissible sickness.

Prions are now known to cause several human neurological disorders. Among these are Creutzfeldt-Jacob sickness, Gerstmann-Straussler syndrome, Fatal Familial Insomnia and Kuru. Except Kuru, the others are rare heritable diseases.

Creutzfeldt-Jacob illness, might be transmitted through ingestion of meat of diseased cattle, but is generally an family sickness affecting center-aged persons. It is thought to be aligned later than human chromosome 20. The afflicted persons manufacture symptoms of higher dementia and generally die within one year.

Gerstmann-Straussler syndrome is plus an familial spongiform encephalopathy affecting center- aged persons. It is thought to be controlled by an autosomal dominant gene which causes a replacement of proline to leucine in the PrP. The affected persons lose run of coordinated motion (ataxia) and mental sickness.

Fatal Familial Insomnia is a rare autosomal-dominant human sickness caused by a mutation of the prion-protein gene. The sickness appearing in center-aged persons is characterized by progressively brusque insomnia, ataxia and future degeneration of determined tissues of the thalamus of the brain  ultimately leading to death.

Kuru was an when prevalent illness found only in some cannibal tribals of Papua-New Guinea who used to practice the tribal ritual of eating the brains of dead kinsmen. Particularlywomen and children used to undertake allocation in this ritual. With the abolition of cannibalism the weakness is now extinct.

Discovery of Mycoviruses:


Mycoviruses recorded in view of that far away away do something morphologically variable forms, viz., bacilliform, rod- shaped, filamentous and herpes types. But majority of the known mycoviruses are typically isodiametric ranging usually from 25 and 50 nm in diameter and particle weight from 6-13 x 106 dalton.
Image result for Mycoviruses

The most outstanding feature common to mycoviruses is possession of double-ashore ribonucleic acid (dsRNA) usually segmented into 1-8 segments when than a quantity molecular weight of 2 to 8.5 x 106 dalton.

The dsRNA segments are separately enclosed into identical capsids. This feature of mycoviruses differentiates them from plant and animal dsRNA viruses in which the genetic material segments are, usually, all enclosed in a single virion.
Replication of Mycoviruses:

Replication of mycoviruses inside the fungal cell has been reviewed by Buck (1979, 1980). He has reported some host enzymes warm of transcribing the ssRNA and dsRNA in laboratory conditions and probably dsRNA in vivo.

Highly specific virus-coded RNA polymerases are necessary for effective in vivo transcription and replication of dsRNA. Such polymerase has been reported in some dsRNA mycoviruses. It is thought that the polymerases remain confined within the virion during the replicative cycle of mycoviruses.

The mechanism of infection and transmission of mycoviruses is yet profound. They have been found in fungal spores and it is believed that they are transmitted through the spores. The presence of viral-RNA in the fungal cells does not appear to show any cellular properties such as antibiotic production.

For example Penicillium notation contains a dsRNA mycovirus, but penicillin production by the fungus is not affected at each and every one. In recent years the dsRNA mycoviruses have attracted the attention of scientists past they have finishing to induce interferon production in animal cells. Also, they operate not appear to the animal cells be toxic unlike supplementary chemicals that induce interferon production.

Image result for Mycoviruses

M. Hollings of Glasshouse Crop Research Institute, USA for the first period gave experimental evidence of viruses in cultivated mushroom Agaricus bisporus causing die-gain sickness in 1962. The most characteristic and consistent features of mushroom virus diseases are the loss of crop and the degenerat in marginal note to of mycelium in the compost.

Before it, no experimental evidence in this area presence of viruses in fungi was at hand even if viruses were thought to be the cause of certain abnormalities in fungi. Several terms have been proposed to denote such viruses, viz., fungal viruses, mycophages, dsRNA plasmids, mycoviruses and virus-gone particles (VLPs); the last two terms have been frequently used by the microbiologists.

Since their discovery, mycoviruses have been reported from all major taxonomic groups of fungi, the number of fungal genera ranging from nearly 50 to 60. Some-important fungi containing mycoviruses are Agaricus bisporus (25-50 nm), Alternaria tenuis (30-40 nm), Aspergillus foetidus (40-42 nm), A. glaucus (25 nm), A. niger (40-42 nm).

Penicillium brevicompactum (40 nm) P. chrysogenum (35 nm), P. funiculosum (25- 30 nm) P. notatum (25 nm), P. stoioniferum (40-45 nm), Peziza ostrachoderma (17 x 350 nm), Endothiaparasitica (300 nm), Laccaria laccata (28 nm), Stemphilium botryosum (25 nm; VLPs), Saccharomyces cerevisiae (40 nm) etc.

Within brackets bearing in mind-door-door to the declare of each fungal species is unmodified the size of the virion. However, it is attractive to note that most of the species of Penicillium and Aspergillus have been found to be attacked by mycoviruses though the latter arc not found therefore frequently in supplement fungal genera. So far afield completely few mycoviruses have been adequately characterized, and most are deserted the virus to the fore particles (VPLs) in electron micrographs.


1.      Bacillus cereus
Food Poisoning

Ingestion of food contaminated with Bacillus cereus or toxins produced by this organism is responsible for foodborne illness. Bacillus cereus produces enterotoxins. It causes food poisoning of two types: diarrheal type, which is characterized by abdominal pain and watery diarrhea; and emetic type which is manifested by profuse vomiting.
2.      Campylobacter jejuni (but also C. fetus, Campylobacter coli)
3.      Clostridium perfringens
4.      Clostridium botulinum
Botulism is caused by a neurotoxin from Clostridium botulinum
5.      E.coli 0157:H7 (Enterohemorrhagic E. coli)
6.      Listeria monocytogenes
7.      Salmonella Typhimurium and S. Enteritidis
8.      Shigella spp
Shigellosis is also known as bacillary dysentery. Most cases are caused by Shigella sonnei. However, S. dysenteriae, S. flexneri and S. boydii can also cause foodborne related illnesses.
9.      Staphylococcus aureus
Staphylococcus aureus makes seven different toxins that are frequently responsible for food poisoning.
10.  Vibrio cholerae
Vibrio choleare produces cholera toxin. Which is an enterotoxin, responsible for profuse watery diarrhea (also termed as rice watery stools).
11.  Yersinia enterocolitica
Parasites
12.  Toxoplasma gondii
Toxoplasmosis is caused by an intracellular protozoan, Toxoplasma gondii, which can infect all species of mammals, including humans
13.  Cryptosporidium
14.  Cyclospora
Virus
15.  Adenovirus
16.  Rotavirus
17.  Calciviruses  (Better known as Norwalk virus)
18.  Norwalk-like virus (or Norovirus)
bacteria এর চিত্র ফলাফল

  1. California Encephalitis virus: California encephalitis virus, a member of the bunyavirus family, was first isolated from mosquitoes in California in 1952, but its name is something of a misnomer because most human disease occurs in the north-central states of USA. The strain of the California Encephalitis virus that causes encephalitis most frequently is called La Crosse (for the city of Wisconsin where it was first isolated).
    La Crosse virus is the most common arboviral cause of encephalitis in the United States of America. It is transmitted by the mosquito Aedes.
  2. Colorado Tick Fever Virus (CTF): Colorado tick fever is a reovirus transmitted by the wood tick among the small rodents eg, Chipmunks and Squirrrels, of the Rocky Mountains. There are approximately 100-300 cases per year in the United States of America.
    This disease occurs primarily in people hiking or camping in the Rocky Moutains and is characterized by fever, headache, retro-orbital pain, and severe myalgia. Diagnosis is done by virus isolation (from blood) or by detecting the rise in antibody titre. No antiviral therapy or vaccine is available. Prevention involves wearing protective clothing and inspecting the skin for ticks.
  3. Eastern Equine encephalitis virus: It is a member of togavirus family. It causes Encephalitis along the east coast of the United States of America. Encephalitis is severe but uncommon. This virus is transmitted to humans by mosquitoes from small wild birds, such as sparrow. There is no antiviral therapy and non vaccine for humans.
  4. Ebola Virus:Ebola virus a member of filovirus family is named for the river in Zaire that was the site of outbreak of hemorrhagic fever in 1976. The mortality rate associated with Ebola virus is nearly 100%. Ebola virus causes shock, gastrointestinal bleeding disseminated intravascular coagulation. Severe thrombocytopenia causes hemorrhages. Most of the cases arise by secondary transmission from contact with the patient’s blood or secretions. Natural host of this virus is unknown. Diagnosis of Ebola viral disease is made by isolating the virus or by detecting rise in antibody titre.
  5. Human African trypanosomiasis (HAT), or African sleeping sickness
  6. Japanese Encephalitis Virus: It is the most common cause of epidemic encephalitis. The disease is most prevalent in South East Asia. Japanese Encephalitis virus is a member of the flavivirus family. It is transmitted to human by certain species of Culex mosquitoes endemic to Asian rice fields. Disease diagnosis can be done by isolating virus, detecting IgM antibody in serum or spinal fluid, or by staining brain tissue with fluorescent antibody. There is no antiviral therapy.
  7. Lassa Fever Virus: This virus was first seen in Lassa town of Nigeria in 1969. Lassa fever virus is the member of arenavirus family. It causes a severe, often fatal hemorrhagic fever, death occurs by vascular collapse.The virus is transmitted to humans by contamination of food or water with animal urine. Small rodent called Mastomys is the natural host for Lassa fever virus. Ribavirin if given early reduces mortality rate. No vaccine is available.
  8.  Marburg Virus: It is the member of the filovirus family. It causes hemorrhagic fever with a mortality rate of nearly 100%. Marburg virus was first recognized as a cause of human disease in 1967 in Marburg, Germany. Natural reservoir of Marburg Virus is still unknown. In 2005, Marburg virus outbreaks killed hundreds of people in Angola. Isolation of virus or detection in rise in antibody titre is used as diagnostic tools. No antiviral therapy and vaccine is available.
     

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